PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_009364-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family C2H2
Protein Properties Length: 160aa    MW: 18022.9 Da    PI: 6.6296
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_009364-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.00014365123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   ++C++C + F ++  L  H++ H
  NNU_009364-RA 43 FSCNYCQRKFYSSQALGGHQNAH 65
                   89******************988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.96E-64070No hitNo description
PROSITE profilePS5015711.0944370IPR007087Zinc finger, C2H2
PROSITE patternPS0002804565IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MEIEPNSSID LTLSNQDLNL ELVLEPSSSS SSSSLGPNEP RVFSCNYCQR KFYSSQALGG  60
HQNAHKLERS LAKRSRELSS AVRPHAALSH RSGADSRRSQ PPFADLEHQR HVERFSGEVG  120
YERREMGYIS AGMEGPWSSI QRPENVQIEE FNHLDLSLRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010259825.11e-114PREDICTED: zinc finger protein 2
SwissprotQ392611e-31ZFP2_ARATH; Zinc finger protein 2
TrEMBLF6GXF34e-54F6GXF3_VITVI; Putative uncharacterized protein
STRINGVIT_11s0052g01120.t011e-53(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.15e-32zinc finger protein 2